Job Description P71298 Confidence 73.10% Date Thu Jan 5 12:12:44 GMT 2012 Rank 33 Aligned Residues 104 % Identity 15% Template c2b9sA_ PDB info PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex Resolution 2.27 Å

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.												310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																.	.	.										.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.																.	.	.										.	.
Query Sequence		I	A	S	A	Y	L	Q	V	L	L	L	T	G	A	R	R	E	E	.	.	.	.	.	.	.	.	.	.	.	I	A	S	L	R	W	S	D	V	D	F	K	W	S	S	.	.	.	M	R	I	K	D	K	I	E	G	.	.	E	R	I	I	P	L	T	P	Y	V	S	E	L	L	N	V	L	A	Q	S	P	N
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.																.	.	.										.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																.	.	.										.	.
Template Conservation
Template Sequence		Q	R	A	V	A	M	Y	F	I	D	R	L	A	L	R	V	G	N	E	K	G	E	D	E	A	D	T	V	G	C	C	S	L	R	V	E	H	I	Q	L	M	P	D	N	I	V	R	F	D	F	L	G	K	D	S	I	R	Y	Q	N	D	V	A	V	L	P	E	V	Y	A	L	L	Q	R	F	T	R	R	K	S
Template Known Secondary structure																							T	T	S						G	G	G		B	G	G	G					T	T	S									G	G	G																						T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	V	N	K	E	G	W	V	F	R	S	N	S	K	S	G	K	I	I	E	P	R	S	A	H	N	R	A	L	V	L	A	E	L	P	H	I	S	L	H	G	L	R	R	S	F	G	T	L	A	E	W
Query Conservation
Alig confidence			.	.	.	.						.	.	.	.	.	.	.																		.	.
Template Conservation			.	.	.	.						.	.	.	.	.	.	.																		.	.
Template Sequence		P	.	.	.	.	G	M	D	I	F	.	.	.	.	.	.	.	D	Q	L	N	P	T	Q	L	N	D	H	L	K	S	F	M	D	.	.	G	L	S	A	K	V	F	R	T	Y	N	A	S	I	T	L	D
Template Known Secondary structure		T	.	.	.	.	T	S	B	T	T	.	.	.	.	.	.	.	T	T											T	T	T	S	T	.	.	T			T	T
Template Predicted Secondary structure			.	.	.	.						.	.	.	.	.	.	.																		.	.
Template SS confidence
		380					.	.	.	.	.								.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions