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Job DescriptionP71298
Confidence99.95%DateThu Jan 5 12:12:44 GMT 2012
Rank5Aligned Residues288
% Identity13%Templatec1crxA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:cre recombinase; PDBTitle: cre recombinase/dna complex reaction intermediate i
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   140.........150... ......160.........170.........180.........190.........200.........210.......
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Query Sequence  SVAWEDYLQELRTG. . ISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTER
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Template Sequence  DEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAA. . . . . . . . . . . . . . . . . . . . . WCKLNNRKWFPAEPEDVRDYLLYLQ
Template Known Secondary structure  TGGGS
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   21........30.........40.........50.... .....60.........70.........
 
   218. 220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  QN. . RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIA. .
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Template Sequence  ARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIR
Template Known Secondary structure  TT

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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   294.....300.........310.........320........ .330.........340.........350.........360.....
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Query Sequence  . SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK. . . . . . . DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF
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Template Sequence  NLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLF
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BGGG
GGG




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TT
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   366. ..370.........380........ .390.........400.........410.........420......
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Query Sequence  RS. . . . . . . . . . NSKSGKIIEPRSAHNRALVLA. . . . . . . . . ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA
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Template Sequence  CRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVN
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   427..430.........440.........
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Query Sequence  LAEKHYRRRPLDLLRKWHEKIET
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Template Sequence  IVMN. YIRNLDSETGAMVRLLED
Template Known Secondary structure  T.STT
GGGS
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   320... ......330.........340.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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