Job Description P77698 Confidence 37.06% Date Thu Jan 5 12:31:47 GMT 2012 Rank 87 Aligned Residues 73 % Identity 14% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	R	V	K	T	I	E	L	I	F	K	L	R	M	E	R	R	S	L	N	A	I	A	K	Y	L	N	D	H	A	V	K	N	F	S	G	K	E	S	A	W	G	P	S	V	I	E	K	L	L	A	N	K	A	L	I	G	I	C	V	P	S	Y	R	A	R	G	K	G	I	S	E	I	A	G	Y	Y	P	R
Query Conservation
Alig confidence														.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation														.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		X	A	E	W	D	V	X	N	I	I	W	D	.	.	K	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	.	.	.	.	.	.	.	.	.	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	.	.	.	.	.	.	.	I	Y	F	Y	S	S
Template Known Secondary structure														.	.	S	S	S												T	T	.	.	.	.	.	.	.	.	.	S																	T	T	S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.
		271	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	D	D	L	F	Y	A	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	K	E	D	D	I	K	X	K	T
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions