Job Description P77698 Confidence 44.09% Date Thu Jan 5 12:31:47 GMT 2012 Rank 66 Aligned Residues 69 % Identity 20% Template d1p6ra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution UNK

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	R	V	K	T	I	E	L	I	F	K	L	R	M	E	R	R	S	L	N	A	I	A	K	Y	L	N	D	H	A	V	K	N	F	S	G	K	E	S	A	W	G	P	S	V	I	E	K	L	L	A	N	K	A	L	I	G	I	C	V	P	S	Y	R	A	R	G	K	G	I	S	E	I	A	G	Y	Y	P	R
Query Conservation
Alig confidence														.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation														.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		D	A	E	L	E	V	M	K	V	I	W	K	.	.	H	S	S	I	N	T	N	E	V	I	K	E	L	S	K	T	.	.	.	.	.	.	.	.	.	S	T	W	S	P	K	T	I	Q	T	M	L	L	R	L	I	K	K	G	A	L	N	H	H	K	E	G	R	.	.	.	.	.	.	.	V	F	V	Y	T	P
Template Known Secondary structure													T	.	.	S	S	S														.	.	.	.	.	.	.	.	.	S																	T	T	S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70
		271	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	D	D	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	D	E	S	D	Y
Template Known Secondary structure		S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions