Job Description P77698 Confidence 31.79% Date Thu Jan 5 12:31:47 GMT 2012 Rank 110 Aligned Residues 79 % Identity 14% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	F	V	P	D	P	D	R	V	K	T	I	E	L	I	F	K	L	R	M	E	R	R	S	L	N	A	I	A	K	Y	L	N	D	H	A	V	K	N	F	S	G	K	E	S	A	W	G	P	S	V	I	E	K	L	L	A	N	K	A	L	I	G	I	C	V	P	S	Y	R	A	R	G	K	G	I	S	E	I
Query Conservation
Alig confidence																				.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																				.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		K	T	Y	E	I	S	S	A	E	W	E	V	M	N	I	I	W	M	.	.	K	K	Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	.	.	.	.	.	.	.	.	.	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	.	.	.	.	.	.	.
Template Known Secondary structure																				.	.		S	S														.	.	.	.	.	.	.	.	.																			T	S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Y	Y	P	R	V	I	S	D	D	L	F	Y	A	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions