Job Description P77698 Confidence 29.29% Date Thu Jan 5 12:31:47 GMT 2012 Rank 123 Aligned Residues 32 % Identity 22% Template c3mzyA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna polymerase sigma-h factor; PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a Resolution 2.50 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	F	K	L	R	M	E	R	R	S	L	N	A	I	A	K	Y	L	N	D	H	A	V	K	N	F	S	G	K	E	S	A	W	G	P	S	V	I	E	K	L	L	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	V	L	T	Y	L	I	R	G	Y	S	Y	R	E	I	A	T	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	L	K	S	I	D	N	T	I	Q
Template Known Secondary structure									T	T	T											T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.														.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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