Job Description P77698 Confidence 99.82% Date Thu Jan 5 12:31:47 GMT 2012 Rank 7 Aligned Residues 139 % Identity 19% Template c3lhkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	I	A	Y	M	R	F	S	S	P	G	Q	M	S	G	D	S	L	N	R	Q	R	R	L	I	A	E	W	L	K	V	N	S	D	Y	Y	L	D	T	I	T	Y	E	D	L	G	L	S	A	F	K	G	K	H	A	Q	S	G	A	F	S	E	F	L	D	A	I	E	H	G	Y	I	L	P	G	T	T	L
Query Conservation
Alig confidence																.	.																										.	.						.	.	.	.	.																						.	.	.
Template Conservation																.	.																										.	.						.	.	.	.	.																						.	.	.
Template Sequence		A	K	I	I	G	Y	A	R	V	S	F	N	A	Q	.	.	K	D	D	L	E	R	Q	I	Q	L	I	K	S	Y	A	E	E	N	G	W	D	I	Q	I	L	.	.	K	D	I	G	S	.	.	.	.	.	G	L	N	E	K	R	K	N	Y	K	K	L	L	K	X	V	X	N	R	K	V	.	.	.	E	K	V
Template Known Secondary structure											S	S	G	G	G	.	.																		T	T							.	.				S		.	.	.	.	.	T	T		T	T													T	T			.	.	.
Template Predicted Secondary structure																.	.																										.	.						.	.	.	.	.																						.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		L	V	E	S	L	D	R	L	S	R	E	K	V	G	E	A	I	E	R	L	K	L	I	L	N	H	G	I	D	V	I	T	L	C	D	N	T	V	Y	N	I	D	S	L	N	E	P	Y	S	L	I	K	A	I	L	I	A	Q	R	A	N	E	E	S	E	I	.	.	.	.	.	.	K	S	S	R	V	K	L	S
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																.	.	.																						.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																.	.	.																						.	.	.	.	.	.	.
Template Sequence		I	I	A	Y	P	D	R	L	T	R	F	G	F	E	.	.	.	T	L	K	E	F	F	K	S	Y	G	T	E	I	V	I	I	N	K	K	H	K	.	.	.	.	.	.	.	T	P	Q	E	E	L	V	E	D	L	I	T	I	V	S	H	F	A	G	K	L	Y	G	X	H	S	H	K	Y	K	K	L	T	K	T
Template Known Secondary structure				S	S						S	S				.	.	.									T	T						S		S	S			.	.	.	.	.	.	.																								T	T
Template Predicted Secondary structure																.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	K	K	R	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	E	I	V	R	E
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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