Return to main results Retrieve Phyre Job Id

Job DescriptionP77698
Confidence29.97%DateThu Jan 5 12:31:47 GMT 2012
Rank120Aligned Residues32
% Identity13%Templatec3egxB_
PDB info PDB header:protein transportChain: B: PDB Molecule:protein transport protein sec24a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23a/24a complexed with the snare protein sec22b and3 bound to the transport signal sequence of the snare protein4 bet1
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330......
Predicted Secondary structure 


















Query SS confidence 
































Query Sequence  RTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL
Query Conservation   


 
  

  
           

 
     
Alig confidence 























.







Template Conservation      

  
 





        .
 
  
  
Template Sequence  STIVRCRSCRTYINPFVSFLDQRR. WKCNLCYR
Template Known Secondary structure  SS

B
TTT

B

TT

SSS.
TTT

Template Predicted Secondary structure 















.




Template SS confidence 
































   426...430.........440......... 450.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions