Job Description P77698 Confidence 99.84% Date Thu Jan 5 12:31:47 GMT 2012 Rank 6 Aligned Residues 129 % Identity 27% Template c3bvpB_ PDB info PDB header:recombination Chain: B: PDB Molecule:tp901-1 integrase; PDBTitle: crystal structure of the n-terminal catalytic domain of tp901-12 integrase Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	I	A	Y	M	R	F	S	S	P	G	Q	M	S	G	D	S	L	N	R	Q	R	R	L	I	A	E	W	L	K	V	N	S	D	Y	Y	L	D	T	I	T	Y	E	D	L	G	L	S	A	F	K	G	K	H	A	Q	S	G	A	F	S	E	F	L	D	A	I	E	H	G	Y	I	L	P	G	T	T	L
Query Conservation
Alig confidence													.	.	.	.	.																										.	.									.	.	.																					.	.	.
Template Conservation													.	.	.	.	.																										.	.									.	.	.																					.	.	.
Template Sequence		K	K	V	A	I	Y	T	R	V	S	T	.	.	.	.	.	G	F	S	I	D	E	Q	I	D	R	L	T	K	Y	A	E	A	M	G	W	Q	V	S	D	T	.	.	Y	T	D	A	G	F	S	G	.	.	.	A	K	L	E	R	P	A	M	Q	R	L	I	N	D	I	E	N	K	A	F	.	.	.	D	T	V
Template Known Secondary structure													.	.	.	.	.																			T							.	.					T			S	.	.	.	S	S	S												G	G	G	T			.	.	.	S
Template Predicted Secondary structure													.	.	.	.	.																										.	.									.	.	.																					.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	S	L	D	R	L	S	R	E	K	V	G	E	A	I	E	R	L	K	L	I	L	N	H	G	I	D	V	I	T	L	C	D	N	T	V	Y	N	I	D	S	L	N	E	P	Y	S	L	I	K	A	I	L	I	A	Q	R	A	N	E	E	S	E	I	K
Query Conservation
Alig confidence																																											.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		L	V	Y	K	L	D	R	L	S	R	S	V	R	D	T	L	Y	L	V	K	D	V	F	T	K	N	K	I	D	F	I	S	L	N	E	S	I	D	T	S	S	.	.	.	.	.	A	M	G	S	L	F	L	T	I	L	S	A	I	N	E	F	E	R	E	L	E
Template Known Secondary structure				S	S						S												T	T	G	G	G	T						T	T	T	T			T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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