Return to main results Retrieve Phyre Job Id

Job DescriptionP77698
Confidence30.79%DateThu Jan 5 12:31:47 GMT 2012
Rank113Aligned Residues65
% Identity14%Templatec3bjiA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: structural basis of promiscuous guanine nucleotide exchange2 by the t-cell essential vav1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280 .........290.........300.........310.........320.........330.........340...
Predicted Secondary structure  ..










































Query SS confidence 






. .






























































Query Sequence  DDLFYAV. . QEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPS
Query Conservation   
 
  
..
                    

 


 
  

  
           

 
       
    
Alig confidence 






..










































.....














Template Conservation 
  
   
  

                         
  
         
 .....  
  

   
  

Template Sequence  KKKWMEQFEMAISNIYPENATANGHDFQMFSFEETTSCKACQMLLRGTFYQG. . . . . YRCHRCRASAHKECL
Template Known Secondary structure  S
TTTTGGG




S

B
TTT
SB

SSS

.....TTT


GGGG
Template Predicted Secondary structure 

























.....




Template SS confidence 







































































   492.......500.........510.........520.........530.........540... ......550........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions