Job Description P77698 Confidence 99.92% Date Thu Jan 5 12:31:47 GMT 2012 Rank 1 Aligned Residues 188 % Identity 20% Template c2r0qF_ PDB info PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	A	I	A	Y	M	R	F	S	S	P	G	Q	M	S	G	D	S	L	N	R	Q	R	R	L	I	A	E	W	L	K	V	N	S	D	Y	Y	L	D	T	I	T	Y	E	D	L	G	L	S	A	F	K	G	K	H	A	Q	S	G	A	F	S	E	F	L	D	A	I	E	H	G	Y	I	L	P	G	T	T
Query Conservation
Alig confidence				.	.												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation				.	.												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		M	I	.	.	I	G	Y	A	R	V	S	S	L	D	Q	.	.	.	.	N	L	E	R	Q	L	E	N	L	K	T	F	G	A	E	K	I	F	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	R	P	I	L	Q	K	A	L	N	F	V	R	M	.	.	.	.	.	G	D	R
Template Known Secondary structure				.	.							B	T	T	B	T	.	.	.	.	T	T									T	T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	.	.	.	.	.	T
Template Predicted Secondary structure				.	.												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		L	L	V	E	S	L	D	R	L	S	R	E	K	V	G	E	A	I	E	R	L	K	L	I	L	N	H	G	I	D	V	I	T	L	C	D	N	T	V	Y	N	I	D	S	L	.	N	E	P	Y	S	L	I	K	A	I	L	I	A	Q	R	A	N	E	E	S	E	I	K	S	S	R	V	K	L	S	W	K	K	K
Query Conservation																																															.
Alig confidence														.																																	.
Template Conservation														.
Template Sequence		F	I	V	E	S	I	D	R	L	G	R	N	.	Y	N	E	V	I	H	T	V	N	Y	L	K	D	K	E	V	Q	L	M	I	T	S	L	P	M	M	N	E	V	I	G	N	P	L	L	D	K	F	M	K	D	L	I	I	Q	I	L	A	M	V	S	E	Q	E	R	N	E	S	K	Q	A	Q	G	I	Q	V	A
Template Known Secondary structure					S	S	G	G	G	G		S	S	.															T						T	T	S	T	T					T	T																							T	T	T	T				T	T	T	T	S	S	S
Template Predicted Secondary structure														.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	D	A	L	E	S	G	T	I	M	T	A	S	C	P	R	W	L	S	L	D	D	K	R	T	A	F	V	P	D	P	D	R	V	K	T	I	E	L	I	F	K	L	R	M	E	R	R	S	L	N	A	I	A	K	Y	L	N	D	H	A	V	K	N	F	S	G	K	E	S	A	W	G	P	S	V	I	E	K
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	K	G	V	Y	K	G	R	P	L	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	S	P	N	A	K	D	P	Q	K	R	V	I	Y	H	R	V	V	E	M	L	E	E	G	Q	A	I	S	K	I	A	K	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	R	Q	T	V	Y	R
Template Known Secondary structure		S	S	S	S				S				.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	T	T		S	S																T	T											T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150													.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.														.	.	.	190	.	.	.	.
		240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	H	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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