Return to main results Retrieve Phyre Job Id

Job DescriptionP77698
Confidence57.84%DateThu Jan 5 12:31:47 GMT 2012
Rank37Aligned Residues90
% Identity18%Templatec2dq3A_
PDB info PDB header:ligaseChain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of aq_298
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   345....350.........360.........370.........380.........390..... ....400.........410.........420
Predicted Secondary structure 


....



Query SS confidence 


















































. . . .
























Query Sequence  KRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL. . . . SVAPEVTAIAEKIRLLDKELRRASV
Query Conservation      

  
   
                   
   
         
    ....               
         
Alig confidence 


















































....
























Template Conservation 
 
 
   
  
   
   

 
  



 


  
 
 
  








   
   

   
    
 

 

  

 
Template Sequence  KPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEE
Template Known Secondary structure 
TTT
GGGTTGGGSS
S
TTTSTT
Template Predicted Secondary structure 








Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   421........430....
Predicted Secondary structure 
Query SS confidence 













Query Sequence  SLKTLKSKGVNSFS
Query Conservation   

 
         
Alig confidence 













Template Conservation      

       
Template Sequence  ELRKVEEELKNTLL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 













   90.........100...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions