Job Description P77698 Confidence 83.78% Date Thu Jan 5 12:31:47 GMT 2012 Rank 16 Aligned Residues 34 % Identity 15% Template c1i3qI_ PDB info PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	V	M	K	C	E	A	C	G	N	T	M	I	V	H	A	V	S	G	S	L	H	G	Y	Y	V	C	P	M	R	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	T	F	R	F	C	R	D	C	N	N	M	L	Y	P	R	E	D	K	E	N	N	R	L	L	F	E	C	R	T	C	S	Y
Template Known Secondary structure							B		S	S	S			B							T	T	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions