Job Description P50465 Confidence 100.00% Date Thu Jan 5 12:04:46 GMT 2012 Rank 6 Aligned Residues 247 % Identity 26% Template c3a46B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of mvnei1/thf complex Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		P	E	G	P	E	I	R	R	A	A	D	N	L	E	A	A	I	K	G	K	P	L	T	D	V	W	F	A	F	P	Q	L	K	.	.	.	.	.	.	.	P	Y	Q	S	Q	L	I	G	Q	H	V	T	H	V	E	T	R	G	K	A	L	L	T	H	F	.	.	.	.	.	.	S	N	D	L	T	L	Y	S	H
Query Conservation																																			.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	G	P	E	V	A	L	T	A	D	I	L	E	K	Y	F	K	G	K	T	L	E	Y	I	D	F	I	S	G	R	Y	S	K	S	E	P	E	G	Y	D	D	F	I	A	N	L	P	L	K	V	S	N	V	D	T	K	G	K	F	L	W	F	E	L	F	D	P	N	D	K	S	N	K	W	Y	I	W	N	T
Template Known Secondary structure																			T	T										S	S	G	G	G	T	S			B	T							T		S										T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		N	Q	L	Y	G	V	W	R	V	V	D	T	G	E	E	P	Q	T	T	R	V	L	R	V	K	L	Q	T	A	D	K	T	I	L	L	Y	.	.	.	.	S	A	S	D	I	E	M	L	T	P	E	Q	L	T	T	H	P	F	L	Q	R	V	G	P	D	V	L	D	P	N	L	T	P	E	V	V	K	E	R	L
Query Conservation																																						.	.	.	.
Alig confidence														.	.	.	.	.	.	.																		.	.	.	.																.																	.	.	.
Template Conservation														.	.	.	.	.	.	.																																					.																	.	.	.
Template Sequence		F	G	L	T	G	M	W	S	L	F	E	A	.	.	.	.	.	.	.	K	Y	T	R	A	V	L	S	F	D	N	E	L	M	A	Y	F	S	D	M	R	N	F	G	T	F	K	F	S	N	S	E	K	E	L	K	.	R	K	L	N	E	L	G	P	D	F	L	K	N	D	D	I	.	.	.	D	I	S	K	I
Template Known Secondary structure			T	T	T					S	S			.	.	.	.	.	.	.	T	T								G	G	G								T	T																.				T	T	S			B	T	T	T		S			.	.	.		G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.																																					.																	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																						.																																																										.	.
Query SS confidence																						.																																																										.	.
Query Sequence		L	S	P	R	F	R	N	R	Q	F	A	G	L	L	L	D	Q	A	F	L	.	A	G	L	G	N	Y	L	R	V	E	I	L	W	Q	V	G	L	T	G	N	H	K	A	K	D	L	N	A	A	Q	L	D	A	L	A	H	A	L	L	E	I	P	R	F	S	Y	A	T	R	G	Q	V	D	E	N	K	H	.	.
Query Conservation																						.																																																										.	.
Alig confidence		.	.	.																		.																																																										.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	K	Y	K	Q	P	I	V	A	L	L	M	D	Q	K	K	I	G	S	G	L	G	N	Y	L	V	A	E	I	L	Y	R	A	K	I	D	P	H	K	L	G	S	N	L	T	D	Q	E	I	E	N	L	W	Y	W	I	K	Y	E	T	K	L	A	Y	D	S	N	H	I	G	Y	M	V	N	L	E	N
Template Known Secondary structure		.	.	.	G	G			S	B								T	T	T	T		B														T	T			T	T		B	G	G	G																								S		S	S	S		G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
																		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	A	L	F	R	F	K	V	F	H	R	D	G	E	P	C	E	R	.	.	C	G	S	I	I	E	K	T	T	L	S	S	R	P	F	Y	W	C	P	G	C	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		E	S	S	K	I	G	R	K	N	Y	H	P	N	I	H	P	T	E	K	E	F	D	F	L	V	Y	R	K	K	K	D	P	N	G	N	K	V	I	A	D	K	I	I	G	S	G	K	N	K	R	T	T	Y	W	A	P	A	I	Q
Template Known Secondary structure						S						S	T	T				S	S	S	S				S	S	T	T		S	B		T	T	S		B							S			T	T									T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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