Job Description P50465 Confidence 96.55% Date Thu Jan 5 12:04:46 GMT 2012 Rank 28 Aligned Residues 49 % Identity 14% Template c2zkqm_ PDB info PDB header:ribosomal protein/rna Chain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	Q	F	A	G	L	L	L	D	Q	A	F	L	A	G	L	G	N	Y	L	R	V	E	I	L	W	Q	V	G	L	T	G	N	H	K	A	K	D	L	N	A	A	Q	L	D	A	L	A	H	A	L
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		R	R	K	I	A	F	A	I	.	.	.	T	A	I	K	G	V	G	R	R	Y	A	H	V	V	L	R	K	A	D	I	D	L	T	K	R	A	G	E	L	T	E	D	E	V	E	R	V	I	T	I	M
Template Known Secondary structure		S	S	B					G	.	.	.	G	G	S	T	T														T			T	T	S	B	T	T	T	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions