Job Description P50465 Confidence 23.17% Date Thu Jan 5 12:04:46 GMT 2012 Rank 141 Aligned Residues 53 % Identity 15% Template c2np2B_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:hbb; PDBTitle: hbb-dna complex Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.			.	240	.	.	.	.	.
Predicted Secondary structure																																																		.			.	.
Query SS confidence																																																		.			.	.
Query Sequence		D	L	N	A	A	Q	L	D	A	L	A	H	A	L	L	E	I	P	R	F	S	Y	A	T	R	G	Q	V	D	E	N	K	H	H	G	A	L	F	R	F	K	V	F	H	R	D	G	E	.	P	C	.	.	E	R	C	G	S	I	I
Query Conservation																																																		.			.	.
Alig confidence																																	.	.	.	.														.			.	.
Template Conservation																																	.	.	.	.
Template Sequence		K	L	E	K	K	Y	I	R	L	V	I	D	A	F	F	E	E	L	K	S	N	L	C	S	N	N	V	I	E	F	R	.	.	.	.	S	F	G	T	F	E	V	R	K	R	K	G	R	L	N	A	R	N	P	Q	T	G	E	Y	V
Template Known Secondary structure																									T	T						T	.	.	.	.	T	T											B	S	S		B		T	T	T			B
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions