Job Description P50465 Confidence 100.00% Date Thu Jan 5 12:04:46 GMT 2012 Rank 2 Aligned Residues 255 % Identity 30% Template c2f5qA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence		P	E	G	P	E	I	R	R	A	A	D	N	L	E	A	A	I	K	G	K	P	L	T	D	V	W	F	A	F	P	Q	L	.	.	.	.	.	.	.	K	P	Y	Q	S	Q	L	I	G	Q	H	V	T	H	V	E	T	R	G	K	A	L	L	T	H	F	S	N	D	L	T	L	Y	S	H	N	Q	L	Y	G	V
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.																														.
Template Conservation																																																																						.
Template Sequence		P	Q	L	P	E	V	E	T	I	R	R	T	L	L	P	L	I	V	G	K	T	I	E	D	V	R	I	F	W	P	N	I	I	R	H	P	R	D	S	E	A	F	A	A	R	M	I	G	Q	T	V	R	G	L	E	R	R	G	K	F	L	K	F	L	L	D	R	D	.	A	L	I	S	H	L	R	M	E	G	R
Template Known Secondary structure																			T	T		B							S		G	G	G				S	S	S									T	T		B								T	T							S	S		.							T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		W	R	V	V	D	T	G	E	E	P	Q	T	T	R	V	L	R	V	K	L	Q	T	A	D	K	T	I	L	L	Y	S	.	.	.	.	A	S	D	I	E	M	L	T	P	E	Q	L	T	T	H	P	F	L	Q	R	V	G	P	D	V	L	D	P	N	L	T	P	E	V	V	K	E	R	L	L	S	P	R	F	R
Query Conservation																																	.	.	.	.
Alig confidence																.	.																.	.	.	.																																								.	.	.
Template Conservation																.	.																																																											.	.	.
Template Sequence		Y	A	V	A	S	A	L	E	P	L	E	P	H	T	.	.	H	V	V	F	C	F	T	D	G	S	E	L	R	Y	R	D	V	R	K	F	G	T	M	H	V	Y	A	K	E	E	A	D	R	R	P	P	L	A	E	L	G	P	E	P	L	S	P	A	F	S	P	A	V	L	A	E	R	A	.	.	.	V	K	T
Template Known Secondary structure							T	T	S				T	T		.	.							T	T	S								T	T														T	T	S	T	T	T	T	T					T	T	S	T	T	S										.	.	.	T	T
Template Predicted Secondary structure																.	.																																																											.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		N	R	Q	F	A	G	L	L	L	D	Q	A	F	L	A	G	L	G	N	Y	L	R	V	E	I	L	W	Q	V	G	L	T	G	N	H	K	A	K	D	L	N	A	A	Q	L	D	A	L	A	H	A	L	L	E	I	P	R	F	S	Y	A	T	R	G	Q	V	.	.	.	.	.	D	E	N	K	H	H	G	A	L
Query Conservation																																																																				.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.
Template Conservation
Template Sequence		K	R	S	V	K	A	L	L	L	D	C	T	V	V	A	G	F	G	N	I	Y	V	D	E	S	L	F	R	A	G	I	L	P	G	R	P	A	A	S	L	S	S	K	E	I	E	R	L	H	E	E	M	V	A	T	I	G	E	A	V	M	K	G	G	S	T	V	R	T	Y	V	N	T	Q	G	E	A	G	T	F
Template Known Secondary structure			S	B						T		T	T	T	S	S	S													T	T			T	T	S	B	G	G	G																							T	T				S	S	S				T	T	S				S	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		226		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		F	.	R	F	K	V	F	H	R	D	G	E	P	C	E	R	C	G	S	I	I	E	K	T	T	L	S	S	R	P	F	Y	W	C	P	G	C	Q
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		Q	H	H	L	Y	V	Y	G	R	Q	G	N	P	C	K	R	C	G	T	P	I	E	K	T	V	V	A	G	R	G	T	H	Y	C	P	R	C	Q
Template Known Secondary structure		G	G	G		S	S	T	T		B	T	S	B		T	T	T			B	B						T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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