Job Description P50465 Confidence 93.55% Date Thu Jan 5 12:04:46 GMT 2012 Rank 35 Aligned Residues 101 % Identity 18% Template c1mx0D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:type ii dna topoisomerase vi subunit b; PDBTitle: structure of topoisomerase subunit Resolution 2.30 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	L	L	Y	S	A	S	D	I	E	M	L	T	P	E	Q	L	T	T	H	P	F	L	Q	R	V	G	P	D	V	L	D	P	N	L	T	P	E	V	V	K	E	R	L	L	S	P	R	F	R	N	R	Q	F	A	G	L	L	L	D	Q	A	F	L	A	G	L	G	N	Y	L	R	V	E	I	L	W	Q
Query Conservation
Alig confidence																																			.	.															.													.	.
Template Conservation																																			.	.															.													.	.
Template Sequence		E	F	I	F	K	D	P	E	G	N	V	T	Y	Y	P	R	L	T	N	K	I	P	K	P	P	Q	E	V	K	P	H	P	Y	.	.	G	V	D	R	E	E	I	K	I	L	I	N	N	L	.	K	R	D	Y	T	I	K	E	F	L	V	N	.	.	E	F	Q	S	I	G	D	T	T	A	D	K	I	L	E	L
Template Known Secondary structure								T	T	S										S													S	T	.	.	T												T		.	S	S			B								.	.			T	T
Template Predicted Secondary structure																																			.	.															.													.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	T	G	N	H	K	A	K	D	L	N	A	A	Q	L	D	A	L	A	H	A	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	K	P	N	K	K	V	K	N	L	T	E	E	E	I	T	R	L	V	E	T	F	K	K
Template Known Secondary structure			T			T	T	S	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions