Job Description P39314 Confidence 47.03% Date Thu Jan 5 11:59:17 GMT 2012 Rank 3 Aligned Residues 117 % Identity 9% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	L	V	T	L	P	V	S	L	I	G	Y	L	V	A	C	Y	W	L	N	T	Q	T	P	D	F	S	L	P	F	G	P	R	P	L	V	F	I	S	L	M	V	A	I	A	V	L	C	S	W	V	G	A	L	C	W	N	V	A	S	Q	L	L	P	T	V	I	L	G	P	L	I	V	F	E	T	L	A
Query Conservation
Alig confidence																																																																										.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	.	.	.	.	T	P	I	S
Template Known Secondary structure										T																			S	S	T	T						T	T		S																							T	T	S								.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	Y	T	F	L	L	R	Q	Q	M	P	P	L	M	T	L	S	G	I	A	L	L	V	I	G	V	V	I	A	V	R	A	K	P	E	K	P	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G	E
Template Known Secondary structure										T	T	T	S																												S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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