Job Description P39314 Confidence 1.45% Date Thu Jan 5 11:59:17 GMT 2012 Rank 79 Aligned Residues 196 % Identity 13% Template c3nd0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sll0855 protein; PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter Resolution 3.20 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																					.	.																									.	.	.
Query SS confidence																					.	.																									.	.	.
Query Sequence		P	V	V	I	P	V	F	A	N	L	L	Y	S	Q	R	D	G	K	L	.	.	A	W	G	K	L	A	P	A	L	I	C	I	G	I	G	L	A	C	V	N	I	A	E	L	.	.	.	N	H	G	L	P	D	F	D	W	A	R	Y	T	S	G	I	V	L	A	L	V	S	V	V	C	W	A	W	Y	A	L	R
Query Conservation																					.	.																									.	.	.
Alig confidence																					.	.																									.	.	.
Template Conservation
Template Sequence		P	L	A	G	V	A	L	I	G	E	E	M	H	P	R	F	R	S	Q	T	L	A	Y	H	S	L	L	F	G	C	V	M	A	T	I	I	L	R	M	I	R	G	Q	S	A	I	I	S	L	T	E	F	K	R	V	P	L	D	S	L	W	M	F	I	I	L	G	I	L	F	G	V	M	G	Y	T	F	N	R	G
Template Known Secondary structure											S	S	S					S	S			T	T																			T		S	S		S	S			T	T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	W	L	R	E	N	P	D	K	H	P	M	M	W	A	T	A	Q	A	L	V	T	L	P	V	S	L	I	G	Y	L	V	A	C	Y	W	L	N	T	Q	T	P	D	F	S	L	P	F	G	P	R	P	L	V	F	I	S	L	M	V	A	I	A	V	L	C	S	W	V	G	A	L	C	W	N	V	A	S
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	F	K	V	L	D	W	F	D	R	L	P	P	L	A	T	K	W	K	G	F	L	L	G	S	I	I	G	I	L	S	L	F	P	L	P	L	T	D	G	G	D	N	A	V	L	W	A	F	N	S	Q	S	H	F	S	T	L	I	L	V	F	C	G	R	F	L	L	T	L	I	C	Y	G	S	.	.	.	.	.
Template Known Secondary structure											T																					T	T	S	S	S	S		S	S	S	S								T	T	S																								T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		Q	L	L	P	T	V	I	L	G	P	L	I	V	F	E	T	L	A	G	L	L	Y	T	F	L	L	.	.	.	.	.	.	R	Q	Q	M	P	P	L	M	T	L	S	G	I	A	L	L	V	I	G	V	V
Query Conservation																												.	.	.	.	.	.
Alig confidence		.																										.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	G	A	I	G	G	I	F	A	P	M	L	G	I	A	S	I	V	S	V	A	M	A	R	H	F	H	L	L	F	P	S	Q	I	P	E	P	A	V	M	A	I	A	G	M	G	A	L	V	A	A	T	V
Template Known Secondary structure		.	T		B			S																								T	T	T		S	S	T							T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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