Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK4
Confidence99.09%DateWed Jan 25 15:20:31 GMT 2012
Rank218Aligned Residues215
% Identity13%Templated1rkxa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV
Query Conservation    
 

 






   


 
 
  
   

 
    
                       
                 
Alig confidence 














..


























































....
Template Conservation      

 







..


  

  
   
  
    
                 
     

 
          ....
Template Sequence  SFWQGKRVFVTGHTG. . FKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE. . . .
Template Known Secondary structure  TT
TTTS..TT
SS
SSSS
TTTTTTS

TT
....
Template Predicted Secondary structure 







..


















....
Template SS confidence 















































































   5....10......... 20.........30.........40.........50.........60.........70........
 
   82.......90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 





















































....
Query SS confidence 











































































. . . .
Query Sequence  WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYN. . . .
Query Conservation                                                             
   

           ....
Alig confidence  .























..........








































....
Template Conservation  .         

             ..........                            
   
            
Template Sequence  . FQPEIVFHMAAQPLVRLSYSEPVE. . . . . . . . . . TYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRE
Template Known Secondary structure  .

S

S



..........T





GGGB



SSS
B
T
Template Predicted Secondary structure  .











..........




















Template SS confidence 















































































   7980.........90.........100.. .......110.........120.........130.........140.......
 
   158.160.........170....... ..180.........190.........200.........210.........220..
Predicted Secondary structure  ........

......
























.
Query SS confidence  . . . . . . . .



















. . . . . .












































.
Query Sequence  . . . . . . . . VMGLAKASLEANVRYMANAM. . . . . . GPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI.
Query Conservation  ........ 
 


            
 ......    
 
    

   
                    
 

   
.
Alig confidence  ........



















......












































.
Template Conservation               
   
                                

                            
Template Sequence  NEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPH
Template Known Secondary structure  TS
B

SSS
GGG





TT


SS
TT


S
TT
Template Predicted Secondary structure 












































Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   223......230...
Predicted Secondary structure  ........
Query SS confidence  . . . . . . . .










Query Sequence  . . . . . . . . EDVGNSAAFLC
Query Conservation  ........



    

 
Alig confidence  ........










Template Conservation         
 
         
Template Sequence  AIRPWQHVLEPLSGYLLLA
Template Known Secondary structure 


T
Template Predicted Secondary structure 

Template SS confidence 


















   228.230.........240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions