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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank19Aligned Residues246
% Identity22%Templatec3uf0A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW
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Template Sequence  SLAGRTAVVTGAGS. . GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR
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TT
TTTS..TT
SSTTTT


TT
S
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   6...10......... 20.........30.........40.........50.........60.........70.........80...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA
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Template Sequence  RVDVLVNNAGIIA. . . . RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAAS
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GGG

TT


GGGTS

SS
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   84.....90...... ...100.........110.........120.........130.........140.........150.........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG
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Template Sequence  KHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHG
Template Known Secondary structure  GGGT
SB
SGGGTSSTTSS
B
GGGGSGGGTT

S
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   243......250....
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Query Sequence  EVVHVDGGFSIA
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Template Sequence  QVLAVDGGWLAS
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STTGGG
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   240.........250.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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