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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank17Aligned Residues249
% Identity23%Templatec3toxG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  SRLEGKIAIVTGASS. . GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR
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TTTT
SSTTS..TT
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TT
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   4.....10........ .20.........30.........40.........50.........60.........70.........80.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  RFGGLDTAFNNAGALGAMGEISSL. SVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA
Template Known Secondary structure  SS







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GGG
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TT
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   82.......90.........100..... ....110.........120.........130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI
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Template Sequence  ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLAPE. TRGFVEGLHALKRIARPEEIAEAALYLASDGASFV
Template Known Secondary structure  TTT
SBSSTTSGGG

TT.TSTTSS
B
SGGGTT
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   161........170.........180.........190.........200.... .....210.........220.........230.........
 
   241........250....
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Query Sequence  SGEVVHVDGGFSIA
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Template Sequence  TGAALLADGGASVT
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STTGGG
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   243......250......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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