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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank13Aligned Residues248
% Identity22%Templatec3svtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: structure of a short-chain type dehydrogenase/reductase from2 mycobacterium ulcerans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50....... ..60.........70.........
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Query Sequence  LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS. . . . DIVLQCDVAEDASIDTMFAELG
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Template Sequence  FQDRTYLVTGGGS. . GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT
Template Known Secondary structure 
TT
TTTS..TT
S
TT

SS


TTS
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   5....10....... ..20.........30.........40.........50.........60.........70.........80..
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVM
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Template Sequence  AWHGRLHGVVHCAGGS. . ENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY
Template Known Secondary structure  S







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GGG

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T
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   83......90........ .100.........110.........120.........130.........140.........150.........160
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG
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Template Sequence  GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASF
Template Known Secondary structure  GGGT
SB
SGGGT

SSSS
B
SGGGTT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   240.........250.....
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Query Sequence  ISGEVVHVDGGFSIAA
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Template Sequence  VTGQVINVDGGQMLRR
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S
STTGGGS
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   241........250......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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