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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank90Aligned Residues240
% Identity23%Templatec3r1iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70.........
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Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG
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Template Sequence  LFDLSGKRALITGAST. . GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMT
Template Known Secondary structure  GG

TT
SSTTS..TT
SSGGGGTT




TT
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   6...10.........20. ........30.........40.........50.........60.........70.........80...
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVM
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Template Sequence  GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY
Template Known Secondary structure  S

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GGG

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG
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Template Sequence  CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTYH. . . . . . . . . . . ALWEPKIPLGRMGRPEELTGLYLYLASAASSY
Template Known Secondary structure  GGGT

B


...........GGGSTTSS
B
GGGTSGGGTT
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   164.....170.........180.........190.........200 .........210.........220.........230..
 
   240.........250...
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Query Sequence  ISGEVVHVDGGFSI
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Template Sequence  MTGSDIVIDGGYTC
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S
STTTT
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   241........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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