Job Description P0AEK4 Confidence 100.00% Date Wed Jan 25 15:20:31 GMT 2012 Rank 113 Aligned Residues 227 % Identity 21% Template c3qljB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	F	L	S	G	K	R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	L	A	F	T	Y	Q	N	.	.	.	.	.	.	.	.	.	.	.	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		M	G	V	V	D	G	R	V	V	I	V	T	G	A	G	G	.	.	G	I	G	R	A	H	A	L	A	F	A	A	E	G	A	R	V	V	V	N	D	I	G	V	G	L	D	G	S	P	A	S	G	G	S	A	A	Q	S	V	V	D	E	I	T	A	A	G	G	E	A	V	A	D	G	S	N	V	A	D	W	D
Template Known Secondary structure				T	T	T	T						T	T	T	T	S	.	.													T	T										B		T	T	S	S	B	T		T	T	S												T	T										T	T	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		S	I	D	T	M	F	A	E	L	G	K	V	W	P	K	F	D	G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	.	.	.	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y
Query Conservation																																																							.	.	.
Alig confidence																																																							.	.	.
Template Conservation
Template Sequence		Q	A	A	G	L	I	Q	T	A	V	E	T	F	G	G	L	D	V	L	V	N	N	A	G	I	V	R	D	R	M	I	A	N	T	S	E	E	E	F	D	A	V	I	A	V	H	L	K	G	H	F	A	T	M	R	H	A	A	A	Y	W	R	G	L	S	K	A	G	K	A	V	D	G	R	I	I	N	T	S	S
Template Known Secondary structure															S															B		G	G	G																																		T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A	K	A	S	L	E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	T	I	E	D	V	G
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	G	L	Q	G	S	V	G	Q	G	N	Y	S	A	A	K	A	G	I	A	T	L	T	L	V	G	A	A	E	M	G	R	Y	G	V	T	V	N	A	I	A	P	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	R	F	D	A	M	A	P	E	N	V	S
Template Known Secondary structure								B	T	T	B																						G	G	G	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T		G	G	G	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																							.	.	.	.	.	.	210	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	A	A	F	L	C	S	D	L	S	A	G	I	S	G	E	V	V	H	V	D	G	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	V	V	W	L	G	S	A	E	A	R	D	V	T	G	K	V	F	E	V	E	G	G	K
Template Known Secondary structure								T	S	G	G	G	T	T			S							T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions