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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank154Aligned Residues235
% Identity17%Templatec3p19A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative blue fluorescent protein; PDBTitle: improved nadph-dependent blue fluorescent protein
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  MK. . . . KLVVITGASS. . GIGEAIARRFSEEGHPLLLLARRVERLKAL. . . . . NLPNTLCAQVDVTDKYTFDTAITRAEK
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   1. .......10.. .......20.........30.........40.. .......50.........60.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGL. . . LNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYC
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   70.........80.........90.........100........ .110.........120.........130.........140......
 
   161........170.........180.........190.........200.........210.........220.........230.... .....
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS. DLSAG
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Template Sequence  GTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVC
Template Known Secondary structure  GGGT

SBSSSGGGG
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   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   240.........
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Query Sequence  ISGEVVHVDG
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Template Sequence  IREIALAPTK
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   227..230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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