Job Description P0AEK4 Confidence 99.50% Date Wed Jan 25 15:20:31 GMT 2012 Rank 209 Aligned Residues 218 % Identity 14% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		L	S	G	K	R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	.	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V	W
Query Conservation																															.
Alig confidence															.	.															.
Template Conservation															.	.
Template Sequence		V	S	Q	S	R	F	L	V	L	G	G	A	G	.	.	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	I	K	A	D
Template Known Secondary structure				T							T	T	T	S	.	.												T	T			S							S																				S	S									T	T	S
Template Predicted Secondary structure															.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	F	D	G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.																														.	.																		.	.	.
Template Conservation																		.	.	.	.	.	.	.																														.	.																		.	.	.
Template Sequence		G	Q	Y	D	Y	V	L	N	L	S	A	L	K	H	V	R	.	.	.	.	.	.	.	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	.	.	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	P	V	.	.	.	N	X	X	G	A	S
Template Known Secondary structure					S											G	G	.	.	.	.	.	.	.	G	G	S	S												T													T	.	.	T		S								S		S	S				.	.	.	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.																														.	.																		.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	A	S	L	E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	.	T	I	E	D	V	G	N	S	A	A	F	L	C	S	D	L	S	A	G	I	S
Query Conservation																																																												.
Alig confidence												.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.								.														.	.	.
Template Conservation												.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		K	R	I	X	E	X	F	L	X	R	.	.	.	.	.	K	S	E	E	I	A	I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	R	I	Q	K	N	.	.	.	.	.	.	.	.	.	.	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C	.	.	.	I	F	G	E	N
Template Known Secondary structure												.	.	.	.	.		T	T	T	S										B	T	T		T	T			T	T	T	T	.	.	.	.	.	.	.	.	.	.								B														.	.	.					T
Template Predicted Secondary structure												.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	V	V	H	V	D	G	G	F	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	I	F	F	P	K	D	X	A	R	F
Template Known Secondary structure		T									S	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions