Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank54Aligned Residues246
% Identity18%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV
Query Conservation    
 

 






   


 
 
  
   

 
    
                       
                 
Alig confidence 














..

































..


























Template Conservation    
 

 






 ..


 


  

  
  
 
  
            ..                           
Template Sequence  ERLAGKTALVTGAAQ. . GIGKAIAARLAADGATVIVSDINAEGAKAAAASI. . GKKARAIAADISDPGSVKALFAEIQAL
Template Known Secondary structure 
TTTT
TTTTS..TT


SS..
TT




TT
Template Predicted Secondary structure 









..




..




















Template SS confidence 















































































   3......10....... ..20.........30.........40.........50. ........60.........70........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL
Query Conservation                                                             
   

            
 
Alig confidence 






















..






















































Template Conservation                         ..                                      

            
  
Template Sequence  TGGIDILVNNASIVPFVAWDDVD. . LDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVA
Template Known Secondary structure  S

S








GGG

..TT



TT
SS
Template Predicted Secondary structure 





















..


































Template SS confidence 















































































   7980.........90.........100. ........110.........120.........130.........140.........150......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGIS
Query Conservation 

            
     
 
    

   
                    
 

   




    

 
  
  

Alig confidence 








































.





































Template Conservation 

          
       
 

 
 

 
 
        .           
  
   




     
 
     

Template Sequence  AKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH. NEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWIT
Template Known Secondary structure  GGGT
SB

TSGG.GGGSSS
S
B
SGGGTT

Template Predicted Secondary structure 

















.













Template SS confidence 















































































   157..160.........170.........180.........190....... ..200.........210.........220.........230.....
 
   242.......250....
Predicted Secondary structure 








Query SS confidence 












Query Sequence  GEVVHVDGGFSIA
Query Conservation 
  
 



  
 
Alig confidence 












Template Conservation 
  
 



    
Template Sequence  GQTLNVDAGMVRH
Template Known Secondary structure  S
STTSS

Template Predicted Secondary structure 






Template SS confidence 












   236...240........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions