Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK4
Confidence96.52%DateWed Jan 25 15:20:31 GMT 2012
Rank349Aligned Residues90
% Identity18%Templatec3n7uD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40......... 50.........60.........70..
Predicted Secondary structure 


















........


















Query SS confidence 
















































. . . . . . . .






















Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE. . . . . . . . EFAAQLGSDIVLQCDVAEDASID
Query Conservation 
  
 

 






   


 
 
  
   

 
    
         ........              
        
Alig confidence 















...





























........






















Template Conservation     
 







 
 ...

  

  
 



 
   
                  

 


  



   



  
 
Template Sequence  AYDLEGKTIGTVGAGR. . . IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTR
Template Known Secondary structure 


STT


S...GGG


SS


T

SSGGG
S
S


TTTT
Template Predicted Secondary structure 









...






















Template SS confidence 















































































   186...190.........200. ........210.........220.........230.........240.........250.........260..
 
   73......80.........90...
Predicted Secondary structure 









Query SS confidence 




















Query Sequence  TMFAELGKVWPKFDGFVHSIG
Query Conservation                       
Alig confidence 




















Template Conservation   

    
  

 

 


 
Template Sequence  GMFNKELIGKLKKGVLIVNNA
Template Known Secondary structure  T
B
TS
TT
S
Template Predicted Secondary structure 









Template SS confidence 




















   263......270.........280...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions