Job Description P0AEK4 Confidence 98.05% Date Wed Jan 25 15:20:31 GMT 2012 Rank 280 Aligned Residues 214 % Identity 9% Template c3m2pD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 4-epimerase; PDBTitle: the crystal structure of udp-n-acetylglucosamine 4-epimerase2 from bacillus cereus Resolution 2.95 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V	W	P	K	F	D	G
Query Conservation
Alig confidence											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	V	T	G	G	T	G	.	.	F	L	G	Q	Y	V	V	E	S	I	K	N	D	G	N	T	P	I	I	L	T	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	D	Y	E	Y	R	V	S	D	Y	T	L	E	D	L	I	N	Q	L	N	D	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T	S	.	.													T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.														.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A	K	A	S	L	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	V	D	A	V	V	H	L	A	A	T	R	G	S	Q	G	K	I	S	E	F	H	D	N	E	I	L	T	Q	N	L	Y	D	A	C	Y	E	N	N	I	S	N	I	V	Y	A	S	T	I	S	A	Y	S	D	E	T	S	L	P	W	N	E	K	E	L	P	L	P	D	L	X	Y	G	V	S	K	L	A	C	E
Template Known Secondary structure		.		S											S	S	S		G	G	G	G																		T										G	G	G				T	T	S		S	B		T	T	S					S	S
Template Predicted Secondary structure		.
Template SS confidence
			61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	T	I	.	.	.	.	.	.	.	.	.	E	D	V	G	N	S	A	A	F	L	C	S	D	L	S	A
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																																															.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation								.	.	.																																																																			.	.	.
Template Sequence		H	I	G	N	I	Y	.	.	.	S	R	K	K	G	L	C	I	K	N	L	R	F	A	H	L	Y	G	F	N	E	K	N	N	Y	X	I	N	R	F	F	R	Q	A	F	H	G	E	Q	L	T	L	H	A	N	S	V	A	K	R	E	F	L	Y	A	K	D	A	A	K	S	V	I	Y	A	L	.	.	.	K	Q
Template Known Secondary structure								.	.	.				S															T	T			S													T	T						T	T			S																				.	.	.
Template Predicted Secondary structure								.	.	.																																																																			.	.	.
Template SS confidence
		140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	G	E	V	V	H	V	D	G	G	F	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	V	S	G	T	F	N	I	G	S	G	D	A	L	T
Template Known Secondary structure		T	T										S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions