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Job DescriptionP0AEK4
Confidence99.97%DateWed Jan 25 15:20:31 GMT 2012
Rank158Aligned Residues234
% Identity17%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.. .......50.........60.........70..
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Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND. . . . . . . . KLKGRVEEFAAQLGSDIVLQCDVAEDASID
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Template Sequence  TGRLAGCTVFITGASR. . GIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS
Template Known Secondary structure 
STTTT
T
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S
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   5....10.........20 .........30.........40.........50.........60.........70.........80..
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  TMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA
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Template Sequence  AAVEKAIKKFGGIDILVNNASAISLTNTLDTP. . . TKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP
Template Known Secondary structure  S











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   83......90.........100.........110.... .....120.........130.........140.........150.........
 
   153......160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  . . IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA
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Template Sequence  VWFKQHCAYTIAKYGMSMYVLGMAEEFKG. EIAVNALWPKTAIHTA. . . . . . . . . AMDMLGGPGIESQCRKVDIIADAA.
Template Known Secondary structure  SSTTT.T

SB
B

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TTGGGG
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   160.........170.........180........ .190.........200.... .....210.........220........
 
   231........240.........250.
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Query Sequence  FLCSDLSAGISGEVVHVDGGF
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Template Sequence  YSIFQKPKSFTGNFV. IDENI
Template Known Secondary structure  TS
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   229230.........240... .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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