Job Description P0AEK4 Confidence 100.00% Date Wed Jan 25 15:20:31 GMT 2012 Rank 144 Aligned Residues 241 % Identity 10% Template c3ioyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: structure of putative short-chain dehydrogenase (saro_0793)2 from novosphingobium aromaticivorans Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		L	S	G	K	R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	.	.	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V
Query Conservation																																																						.	.
Alig confidence															.	.																																						.	.
Template Conservation															.	.
Template Sequence		F	A	G	R	T	A	F	V	T	G	G	A	N	.	.	G	V	G	I	G	L	V	R	Q	L	L	N	Q	G	C	K	V	A	I	A	D	I	R	Q	D	S	I	D	K	A	L	A	T	L	E	A	E	S	G	P	E	V	M	G	V	Q	L	D	V	A	S	R	E	G	F	K	M	A	A	D	E	V	E	A	R
Template Known Secondary structure			T	T							T	T	T	S	.	.	T											T	T	T								S														T				T	T								T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		W	P	K	F	D	G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	.	.	.	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.
Template Conservation
Template Sequence		F	G	P	V	S	I	L	C	N	N	A	G	V	N	L	F	Q	P	I	E	E	S	S	Y	D	D	W	D	W	L	L	G	V	N	L	H	G	V	V	N	G	V	T	T	F	V	P	R	M	V	E	R	V	K	A	G	E	Q	K	G	G	H	V	V	N	T	A	S	M	A	A	F	L	A	A	G	S	P	G	I
Template Known Secondary structure																				G	G	G														T																				T	T	S												G	G	G	T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		M	G	L	A	K	A	S	L	E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	.	.	.	T	P	I	R	R	T	V	T	I	E	D	V	G	N	S	A	A	F	L	C	S	D
Query Conservation																																																									.	.	.
Alig confidence																																																									.	.	.
Template Conservation
Template Sequence		Y	N	T	T	K	F	A	V	R	G	L	S	E	S	L	H	Y	S	L	L	K	Y	E	I	G	V	S	V	L	C	P	G	L	V	K	H	E	F	G	M	E	P	D	V	I	G	A	R	V	I	E	A	M	K	A	N	R	L	H	I	F	S	H	P	D	H	K	E	E	L	R	E	V	F	D	E	I	I	A	E
Template Known Secondary structure																					G	G	G	T											B				S	S	B																T		S						G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	G	I	S	G	E	V	V	H	V	D	G	G	F	S
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		Y	Q	D	Y	P	.	.	.	.	.	.	K	D	P	G	Y	D
Template Known Secondary structure							.	.	.	.	.	.			T	T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.							280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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