Job Description P0AEK4 Confidence 98.30% Date Wed Jan 25 15:20:31 GMT 2012 Rank 262 Aligned Residues 211 % Identity 11% Template c3gpiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus Resolution 1.44 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V	W	P	K	F	D
Query Conservation
Alig confidence										.		.	.																														.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation										.		.	.																														.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		S	K	I	L	I	A	G	C	.	G	.	.	D	L	G	L	E	L	A	R	R	L	T	A	Q	G	H	E	V	T	G	L	R	R	S	A	Q	P	M	P	A	.	.	.	.	.	.	.	.	.	G	V	Q	T	L	I	A	D	V	T	R	P	D	T	L	A	S	I	V	H	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	S	.	.													T	T									T	T	S				T	.	.	.	.	.	.	.	.	.	T								T	T		G	G	G		T	T	G	G	G	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.		.	.																														.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.		10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A	K	A	S	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	E	I	L	V	Y	C	V	A	A	S	E	Y	S	L	S	Y	V	E	G	L	R	N	T	L	S	A	L	E	G	A	P	L	Q	H	V	F	F	V	S	S	T	G	V	Y	G	Q	E	V	E	E	W	L	D	E	D	T	P	P	I	A	K	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S															S											T	T	T	S											G	G	G						S	S				T	T	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	T	I	E	D	V	G	N	S	A	A	F	L	C	S	D	L	S	A	G	I	S	G	E	V	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	G	K	R	M	L	E	A	E	A	L	L	A	A	Y	S	S	T	I	L	R	F	S	G	I	Y	G	P	G	R	L	R	M	I	R	Q	A	Q	T	P	E	Q	W	P	A	R	N	A	W	T	N	R	I	H	R	D	D	G	A	A	F	I	A	Y	L	I	Q	Q	R	S	H	A	V	P	E	R	L	Y	I
Template Known Secondary structure														G	G	G	S	S											B	T	T	B							T	T		G	G	G	S		S	S	B																							T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	G	G	F	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	D	N	Q	P	L	P
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions