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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank63Aligned Residues239
% Identity20%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  KTLDKQVAIVTGASR. . GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK
Template Known Secondary structure 
TTTT
S
SS..TT
SST




TT
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   3......10....... ..20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAV. . . FRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYA
Template Known Secondary structure  S











GGG

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T

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   81........90.........100.........110......... 120.........130.........140.........150.......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI
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Template Sequence  AAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLASPQAGYI
Template Known Secondary structure  GGGT

SB




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B
SGGGTT
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   158.160.........170.........180.........190..... ....200.........210.........220........
 
   241........250....
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Query Sequence  SGEVVHVDGGFSIA
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Template Sequence  TGTTLHVNGGMFMS
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S
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   236...240.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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