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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank112Aligned Residues228
% Identity21%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  MIDLTGKTSLITGASS. . GIGSAIARLLHKLGSKVIISGSNEEKLKSLGN. . . . . . ALKDNYTIEVCNLANKEECSNLIS
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   1........10...... ...20.........30.........40........ .50.........60.........70..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  KTSNLDILVCNAG. . . . . . . . . . . . . . . ITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYC
Template Known Secondary structure  T
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   73......80..... ....90.........100.........110.........120.........130.......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI
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Template Sequence  ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE. . KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI
Template Known Secondary structure  GGGT
SB

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B
SGGGTT
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   150.........160.........170.........180.........190. ........200.........210.........220.......
 
   241........250...
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Query Sequence  SGEVVHVDGGFSI
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Template Sequence  TGQTLHVNGGMLM
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   228.230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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