Job Description P0AEK4 Confidence 98.03% Date Wed Jan 25 15:20:31 GMT 2012 Rank 282 Aligned Residues 172 % Identity 13% Template c3ew7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162. Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V	W	P	K	F	D
Query Conservation
Alig confidence												.	.																																.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																																.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	G	I	I	G	A	T	G	.	.	R	A	G	S	R	I	L	E	E	A	K	N	R	G	H	E	V	T	A	I	V	R	N	A	G	K	I	T	Q	T	H	.	.	.	.	.	.	.	.	K	D	I	N	I	L	Q	K	D	I	F	D	L	T	L	S	D	L	S	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T	S	.	.													T	T								S		S								.	.	.	.	.	.	.	.	S	S	S							G	G	G							T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.																																.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A	K	A	S	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	N	V	V	V	D	A	Y	G	I	S	P	D	E	A	E	K	H	V	T	S	L	D	H	L	I	S	V	L	N	G	T	V	S	P	R	L	L	V	V	G	G	A	A	.	.	.	A	P	Y	Y	P	T	A	R	A	Q	A	K	Q	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S								S	S	T	T	T	T	T	S														S			S	S										.	.	.				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template SS confidence
																			61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	T	I	E	D	V	G	N	S	A	A	F	L	C	S	D	L	S	A	G	I	S	G	E	V	V	H
Query Conservation
Alig confidence								.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation								.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		H	L	K	S	H	Q	.	.	.	.	.	.	.	A	E	F	S	W	T	Y	I	S	P	S	A	X	F	E	P	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	X	E	D	Y	A	I	A	V	L	D	E	I	.	.	E	R	P	N	H	L	N	E	H	F	T
Template Known Secondary structure					T	T	T	.	.	.	.	.	.	.	T	T	S								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.		S		S		T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		140	.	.	.	.	.								.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																							.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.
		247	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions