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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank37Aligned Residues246
% Identity24%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.........60.........70.........80.
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Query Sequence  FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV
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Template Sequence  SLKGKIALVTGASY. . GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESE
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TT
T
SS..TT
SSTT




TT
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   11........20.... .....30.........40.........50.........60.........70.........80........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL
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Template Sequence  VGIIDILVNNAGIIRRVPMIEMT. . . AAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA
Template Known Secondary structure  T












GGGS
...TT


GGGT


TT
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   8990.........100.........110. ........120.........130.........140.........150.........160.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGIS
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Template Sequence  AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTHP. . . . . . FDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVN
Template Known Secondary structure  GGGT
SB

TT

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TT
S
B
SGGGTT

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   166...170.........180.........190.........200... ......210.........220.........230.........
 
   242.......250.........260
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Query Sequence  GEVVHVDGGFSIAAMNELE
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Template Sequence  GHILYVDGGIL. AYIGKQP
Template Known Secondary structure  S
STTGG.G





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   252.......260.. .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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