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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank44Aligned Residues244
% Identity18%Templatec3bmrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pteridine reductase; PDBTitle: structure of pteridine reductase 1 (ptr1) from trypanosoma2 brucei in ternary complex with cofactor (nadp+) and3 inhibitor (compound ax6)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40. ........50.........60.........70.........80..
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Query Sequence  SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. . DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW
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Template Sequence  EAPAAVVTGAAK. . RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVQADLTNSNVLPASCEEIINSC
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TTTTS..TT


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   2.......10... ......20.........30.........40.........50.........60.........70.........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA
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Template Sequence  FRAFGRCDVLVNNASAFYPTPLVGKTVETQVAELIGTNAIAPFLLTMSFAQ. RQSNLSIVNLCDAMVDQPCMAFSLYNMG
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   81........90.........100.........110.........120.........130. ........140.........150.........
 
   163......170.........180.........190.........200.........210....... ..220.........230.........240.
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Query Sequence  KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR. RTVTIEDVGNSAAFLCSDLSAGIS
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Template Sequence  KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG. . . . EEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYIT
Template Known Secondary structure  GGGT
SS
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SSS
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SGGGTT

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   178.180.........190.........200.........210.... .....220.........230.........240.........250...
 
   242.......250.......
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Query Sequence  GEVVHVDGGFSIAAMN
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Template Sequence  GSIIKVDGGLSL. . VH
Template Known Secondary structure  S
STTGGG..

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   254.....260..... ..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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