Job Description P0AEK4 Confidence 98.29% Date Wed Jan 25 15:20:31 GMT 2012 Rank 263 Aligned Residues 200 % Identity 15% Template c2vrcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:triphenylmethane reductase; PDBTitle: crystal structure of the citrobacter sp. triphenylmethane2 reductase complexed with nadp(h) Resolution 2.5 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	.	.	G	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V	W	P	K	F
Query Conservation																										.	.
Alig confidence											.	.														.	.																					.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation											.	.																																				.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		S	I	A	V	T	G	A	T	G	.	.	Q	L	G	G	L	V	I	Q	H	L	X	A	A	V	P	A	S	Q	I	I	A	I	V	R	N	V	E	K	A	S	T	L	A	D	Q	.	.	.	.	.	G	V	E	V	R	H	G	D	Y	N	Q	P	E	S	L	Q	K	A	F	A	.	.	.	.	.	.	.	G	V
Template Known Secondary structure							S	T	T	S	.	.														S		G	G	G						S	S	G	G	G	G						T	.	.	.	.	.	T								T	T		G	G	G						T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure											.	.																																				.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A	K	A	S
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Sequence		S	K	L	L	F	I	S	G	P	H	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	L	L	I	V	Q	H	A	N	V	V	K	A	A	R	D	A	G	V	K	H	I	A	Y	T	G	Y	A	F	A	E	E	S	I	I	P	L	A	H	V	H	L	A	T	.	.
Template Known Secondary structure		S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T		S								T	T	G	G	G		S	S										.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.																						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		L	E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	.	.	T	I	E	D	V	G	N	S	A	A	F	L	C	S	D	L	S	A	G	I	S	G	E
Query Conservation																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.																																																.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.																																																															.	.
Template Sequence		.	.	.	.	.	.	.	.	E	Y	A	T	R	T	T	N	I	P	Y	T	F	L	R	N	A	L	Y	T	D	F	F	V	N	E	G	L	R	A	S	T	E	S	G	A	I	V	T	N	A	G	S	G	I	V	N	S	V	T	R	N	E	L	A	L	A	A	A	T	V	L	.	.	T	E	E	G	H	E	N	K
Template Known Secondary structure		.	.	.	.	.	.	.	.						T	T	T											B	S	T	T	T	S	S	T	T								S					S		T	T			B			B														.	.	T	S	S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																															.	.
Template SS confidence
										125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	H	V	D	G	G	F	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	N	L	V	S	N	Q	P	W	T
Template Known Secondary structure								S	S		B
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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