Job Description P0AEK4 Confidence 99.56% Date Wed Jan 25 15:20:31 GMT 2012 Rank 208 Aligned Residues 222 % Identity 13% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure													.																						.								.	.	.	.	.
Query SS confidence													.																						.								.	.	.	.	.
Query Sequence		F	L	S	G	K	R	I	L	V	T	G	.	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	.	L	A	F	T	Y	Q	N	.	.	.	.	.	D	K	L	K	G	R	V	E	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F
Query Conservation													.																						.								.	.	.	.	.
Alig confidence													.				.	.																	.								.	.	.	.	.
Template Conservation																	.	.
Template Sequence		T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	.	.	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I
Template Known Secondary structure				T	T							S			S	S	.	.	S												T	T								S	S																			T	T										T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.			.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																																																				.	.
Query SS confidence											.	.	.	.	.	.																																																				.	.
Query Sequence		A	E	L	G	K	V	W	P	K	.	.	.	.	.	.	F	D	G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	.	.	N	P	G	S	A	L	L	T	L	S	Y	L
Query Conservation											.	.	.	.	.	.																																																				.	.
Alig confidence											.	.	.	.	.	.																																																				.	.
Template Conservation
Template Sequence		E	F	I	Y	D	T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N
Template Known Secondary structure						S		T	T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S
Template Predicted Secondary structure
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	R	A	I	P	N	Y	N	V	M	G	L	A	K	A	S	L	E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	T	V	T	I	E	D	V	G	N
Query Conservation
Alig confidence							.	.																																										.	.	.	.	.	.														.	.	.
Template Conservation							.	.																																										.	.	.	.	.	.														.	.	.
Template Sequence		H	G	T	F	G	.	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	.	.	.	.	.	.	N	N	I	I	A	E	G	I	E	K	M	G	V	.	.	.	R	T	F	S	Q	K	E	M	A	F
Template Known Secondary structure		T	T		S	S	.	.		B	T	T								G	G	G								S	S		T	T	T															.	.	.	.	.	.			T	T						T	T	T		.	.	.	B
Template Predicted Secondary structure							.	.																																										.	.	.	.	.	.														.	.	.
Template SS confidence
		830	.	.	.	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.							.	.	.	.	880	.	.	.	.	.	.	.	.				.	890	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	F	L	C	S	D	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	L	G	L	L	T	P	E	V
Template Known Secondary structure					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		904	.	.	.	.	.	910	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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