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Job DescriptionP0AEK4
Confidence99.94%DateWed Jan 25 15:20:31 GMT 2012
Rank181Aligned Residues225
% Identity14%Templatec2qq5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40......... 50.........60.........70.........80.
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Query Sequence  FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE. EFAAQLGSDIVLQCDVAEDASIDTMFAELGKV
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Template Sequence  PMNGQVCVVTGASR. . GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE
Template Known Secondary structure  TTTT
SSTTS..TT
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   4.....10....... ..20.........30.........40.........50.........60.........70.........80.
 
   82.......90.... .....100.........110.........120.........130.........140.........150.......
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Query Sequence  WPKFDGFVHSIGF. . . . APGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYN
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Template Sequence  QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV
Template Known Secondary structure  TT





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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   158.160.........170.........180.........190.........200.........210 .........220.........
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Query Sequence  VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHC. . . . . . . EAVTPIRRTVTIEDVGNSA
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Template Sequence  PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRY
Template Known Secondary structure  GGGT



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   162.......170.........180.........190.........200.........210.........220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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