Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK4
Confidence99.97%DateWed Jan 25 15:20:31 GMT 2012
Rank164Aligned Residues218
% Identity17%Templatec2nwqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable short-chain dehydrogenase; PDBTitle: short chain dehydrogenase from pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD
Query Conservation 
 






   


 
 
  
   

 
    
                       
                      
Alig confidence 









..



































































Template Conservation 








 ..


   
  
   
  

   
                       
                      
Template Sequence  STLFITGATS. . GFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAXSAAVDNLPEEFATLR
Template Known Secondary structure 
SSTTT..SSTT
S
TTTS


TT
T

GGGSS

Template Predicted Secondary structure 




..

















Template SS confidence 















































































   3......10.. .......20.........30.........40.........50.........60.........70.........80
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASL
Query Conservation                                                        
   

            
 


   
Alig confidence 












.

































































Template Conservation               .                               
         
  

            
  

 

Template Sequence  GLINNAGLALGTD. PAQSCDLDDWDTXVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFV
Template Known Secondary structure 








.
GGG

T
TT


GGGTS

TT
Template Predicted Secondary structure 








.







































Template SS confidence 















































































   81........90... ......100.........110.........120.........130.........140.........150.........
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  EANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVH
Query Conservation           
     
 
    

   
                    
 

   




    

 
  
  


  
 
Alig confidence 




























......................



















.







Template Conservation        

 

   

 
  
 

 
 
 ......................    
  

  
  
     .   
    
Template Sequence  EQFSLNLRCDLQGTGVRVTNLEPGLCEGA. . . . . . . . . . . . . . . . . . . . . . HPIQPEDIAETIFWIXNQPA. HLNINSLE
Template Known Secondary structure  TT
TTS


SB


......................

B
TS
T.T



Template Predicted Secondary structure 










......................








.

Template SS confidence 















































































   160.........170.........180........ .190.........200........ .210......
 
   247..250
Predicted Secondary structure 


Query SS confidence 



Query Sequence  VDGG
Query Conservation 



Alig confidence 



Template Conservation 
   
Template Sequence  IXPV
Template Known Secondary structure 

T
Template Predicted Secondary structure 

Template SS confidence 



   237..240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions