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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank141Aligned Residues238
% Identity20%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  SALQGKVALITGASS. . GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE
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TTTT
STTS..TT
S
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   3......10....... ..20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  ALGGLDILVNNAGIXLLGPVEDAD. . . . TTDWTRXIDTNLLGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQ
Template Known Secondary structure  S

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GGGT


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   81........90.........100.... .....110.........120.........130.........140.........150......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI
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Template Sequence  ATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH. TATKEXYEQRISQIRKLQAQDIAEAVRYAVT. APHHA
Template Known Secondary structure  GGGT

SB
SSGGGG


.TSSS

B
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   157..160.........170.........180.........190........ .200.........210.........220......... 230....
 
   241......
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Query Sequence  SGEVVHV
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Template Sequence  TVHEIFI
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   235....240.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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