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Job DescriptionP0AEK4
Confidence98.19%DateWed Jan 25 15:20:31 GMT 2012
Rank270Aligned Residues237
% Identity12%Templatec2hunB_
PDB info PDB header:lyaseChain: B: PDB Molecule:336aa long hypothetical dtdp-glucose 4,6-dehydratase; PDBTitle: crystal structure of hypothetical protein ph0414 from pyrococcus2 horikoshii ot3
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. . . DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  MHSMKLLVTGGMG. . FIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRK. . .
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TT
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TT

GGGGTTTTT
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   1........10... ......20.........30.........40.........50.........60.........70.....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  . . . . . . VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSS
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TTSGGGG


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   76...80.........90.........100.........110.........120.........130.........140.........
 
   161........170.........180.........190.........200.........210.........220.. .......230.
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI. . . . . . . . . EDVGNSAAF
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Template Conservation                                   
                                    
 
 
     
Template Sequence  PYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIEL
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STT

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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   232.......240.........250....
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Query Sequence  LCSDLSAGISGEVVHVDGGFSIA
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Template Sequence  VL. . . LKGESREIYNISAGEEKT
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TT


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   230. ........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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