Job Description P0AEK4 Confidence 98.63% Date Wed Jan 25 15:20:31 GMT 2012 Rank 239 Aligned Residues 232 % Identity 12% Template c2hrzA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: the crystal structure of the nucleoside-diphosphate-sugar epimerase2 from agrobacterium tumefaciens Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		L	S	G	K	R	I	L	V	T	G	V	A	S	K	L	S	I	A	Y	G	I	A	Q	A	M	H	R	E	G	A	E	L	A	F	T	Y	Q	N	D	K	L	K	G	R	V	E	.	.	E	F	A	A	Q	L	G	S	D	I	V	L	Q	C	D	V	A	E	D	A	S	I	D	T	M	F	A	E	L	G	K	V
Query Conservation																																																.	.
Alig confidence															.	.																																.	.																													.	.	.	.
Template Conservation															.	.																																																														.	.	.	.
Template Sequence		F	Q	G	X	H	I	A	I	I	G	A	A	G	.	.	X	V	G	R	K	L	T	Q	R	L	V	K	D	G	S	L	G	G	K	P	V	E	K	F	T	L	I	D	V	F	Q	P	E	A	P	A	G	F	S	G	A	V	D	A	R	A	A	D	L	S	A	P	G	E	A	E	K	L	V	E	A	.	.	.	.
Template Known Secondary structure			S								T	T	T	S	.	.																	T	T											S	S						T	T			S									T	T	S	T	T								T	.	.	.	.
Template Predicted Secondary structure															.	.																																																														.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		W	P	K	F	D	G	F	V	H	S	I	G	F	A	P	G	D	Q	L	D	G	D	Y	V	N	A	V	T	R	E	G	F	K	I	A	H	D	I	S	S	Y	S	F	V	A	M	A	K	A	C	R	S	M	L	N	P	G	S	A	L	L	T	L	S	Y	L	G	A	E	R	A	I	P	N	Y	N	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.																										.	.	.	.	.	.	.	.																																											.	.	.
Template Conservation		.	.																										.	.	.	.	.	.	.	.
Template Sequence		.	.	R	P	D	V	I	F	H	L	A	A	I	V	S	G	E	A	E	L	D	F	D	K	G	Y	R	.	.	.	.	.	.	.	.	I	N	L	D	G	T	R	Y	L	F	D	A	I	R	I	A	N	G	K	D	G	Y	K	P	R	V	V	F	T	S	S	I	A	V	F	G	A	P	L	P	Y	P	I	P	D
Template Known Secondary structure		.	.			S																							.	.	.	.	.	.	.	.			T																													G	G	G			S	S			S	S	B		T
Template Predicted Secondary structure		.	.																										.	.	.	.	.	.	.	.
Template SS confidence
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
											159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	G	L	A	K	A	S	L	E	A	N	V	R	Y	M	A	N	A	M	G	P	E	G	V	R	V	N	A	I	S	A	G	P	I	R	T	L	A	A	S	G	I	K	D	F	R	K	M	L	A	H	C	E	A	V	T	P	I	R	R	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.
Template Sequence		E	F	H	T	T	P	L	T	S	Y	G	T	Q	K	A	I	C	E	L	L	L	S	D	Y	S	R	R	G	.	.	.	F	F	D	G	I	G	I	R	L	P	T	I	C	I	R	P	G	K	P	N	A	A	A	S	G	F	F	S	N	I	L	R	E	P	L	V	G	Q	E	A	V	L	P	V	P	E	S	I	R
Template Known Secondary structure		T						S	S																			T	T	.	.	.	S												T	T			S	S				S	G	G	G											T	T							S		T	T
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
				219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	V	T	I	E	D	V	G	N	S	A	A	F	L	C	S	D	L	S	A	G	I	S	G	E	V	V	H	V	D	G	G	F	S	I	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		H	W	H	A	S	P	R	S	A	V	G	F	L	I	H	G	A	X	I	D	V	E	K	V	G	P	R	R	N	L	S	X	P	G	L	S	A	T
Template Known Secondary structure																				S							S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions