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Job DescriptionP0AEK4
Confidence99.40%DateWed Jan 25 15:20:31 GMT 2012
Rank212Aligned Residues220
% Identity17%Templatec2gn9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30. ........40.........50.........60.........70.........80.
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Query Sequence  LSGKRILVTGVASKLSIAYGIAQAMHRE. . GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV
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Template Sequence  LDNQTILITGGTG. . SFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND. PRMRFFIGDVRDLE. . . . . . . RLNYA
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BS
TTTS..SB
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   8.10.........20 .........30.........40.........50........ .60.........70.. .....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL
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Template Sequence  LEGVDICIHAAALKHVPIAEYNPL. . . . . . . . . . . ECIKTNIMGASNVINACLKNAISQVIALSTDKAANPIN. . . LYGA
Template Known Secondary structure  TTT
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   78.80.........90.........100. ........110.........120.........130......... 140...
 
   162.......170.........180.........190.........200.........210........ .220.........230.....
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Query Sequence  AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR. . . . . . TVTIEDVGNSAAFLCSD
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Template Sequence  TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSL. .
Template Known Secondary structure  GGG

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   144.....150.........160.........170.........180.........190.........200.........210.........220.
 
   236...240.........250
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Query Sequence  LSAGISGEVVHVDGG
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Template Sequence  . KRMHGGEIFVPKIP
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   222.......230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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