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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank96Aligned Residues245
% Identity19%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK
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Template Sequence  FSDLRDKVVIVTGASM. . GIGRAIAERFVDEGSKVIDLSIH. . . . . . . . . . DPGEAKYDHIECDVTNPDQVKASIDHIFK
Template Known Secondary structure 
GGGTT
T
SS..TT
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S
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TT
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   2.......10....... ..20.........30.........40 .........50.........60.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
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Template Sequence  EYGSISVLVNNAGIESYGKIESMS. . . MGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYV
Template Known Secondary structure  S









B
TTTS
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GGGTS

TTB
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   70.........80.........90... ......100.........110.........120.........130.........140......
 
   161........170.........180.........190.........200. ........210.........220.........230.
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Query Sequence  LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK. . . . . . . . . DFRKMLAHCEAVTPIRRTVTIEDVGNSAAF
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Template Sequence  TSKHAVIGLTKSIALDYAPL. LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAF
Template Known Secondary structure  TTT.S
SBSS
S
STTSS
B
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   147..150.........160...... ...170.........180.........190.........200.........210.........220.....
 
   232.......240.........250.........260.
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Query Sequence  LCSDLSAGISGEVVHVDGGFSIAAMNELEL
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Template Sequence  LASREASFITGTCLYVDGGLSIRAPISTPE
Template Known Secondary structure  SGGGTT

S
STTGGG

S




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   226...230.........240.........250.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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