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Job DescriptionP0AEK4
Confidence100.00%DateWed Jan 25 15:20:31 GMT 2012
Rank143Aligned Residues233
% Identity12%Templatec1zbqB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:17-beta-hydroxysteroid dehydrogenase 4; PDBTitle: crystal structure of human 17-beta-hydroxysteroid dehydrogenase type 42 in complex with nad
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70...
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Query Sequence  MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN. . . . . . . DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDT
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Template Sequence  PLRFDGRVVLVTGAGA. . GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEK
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TT
TTTTS..TT





TTS



STT

S
GGG
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   4.....10......... 20.........30.........40.........50.........60.........70.........80.
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI
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Template Sequence  VVKTALDAFGRIDVVVNNAGILRDRSFARIS. . . DEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGN
Template Known Secondary structure  S











GGG

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   82.......90.........100.........110.. .......120.........130.........140.........150........
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC
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Template Sequence  FGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAG. SRMTQTVMPED. . . . . . . . . . . LVEALKPEYVAPLVLWLC
Template Known Secondary structure  TT
GGGT


.STTTTTTS
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GGGTT
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   159160.........170.........180.........190....... ..200........ .210.........220......
 
   234.....240.........250.
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Query Sequence  SDLSAGISGEVVHVDGGF
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Template Sequence  HESCE. ENGGLFEVGAGW
Template Known Secondary structure  STT

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S
TT
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   227..230. ........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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