 |
Job Description | P0AEK4 | Confidence | 96.62% | Date | Wed Jan 25 15:20:31 GMT 2012 |
Rank | 346 | Aligned Residues | 88 |
% Identity | 18% | Template | c1wwkA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; |
PDBTitle: crystal structure of phosphoglycerate dehydrogenase from pyrococcus2 horikoshii ot3
|
Resolution | 1.90 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | S | G | K | R | I | L | V | T | G | V | A | S | K | L | S | I | A | Y | G | I | A | Q | A | M | H | R | E | G | A | E | L | A | F | T | Y | Q | N | D | K | L | K | G | R | V | . |
. |
. |
. |
. |
. |
E | E | F | A | A | Q | L | G | S | D | I | V | L | Q | C | D | V | A | E | D | A | S | I | D | T | M | F | A |
Query Conservation |   |
  |
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|
|
|
|
|   |
|   | . | . | . |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|
|
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |
Template Sequence |   |
E | L | E | G | K | T | I | G | I | I | G | F | G | R | . |
. |
. |
I | G | Y | Q | V | A | K | I | A | N | A | L | G | M | N | I | L | L | Y | D | P | Y | P | N | E | E | R | A | K | E | V | N | G | K | F | V | D | L | E | T | L | L | K | E | S | D | V | V | T | I | H | V | P | L | V | E | S | T | Y | H | L | I | N |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |
|
| S |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  | T | T |
|  |  |
|
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
|
| S | T | T | T | T | T |
| B |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | G | K | V | W | P | K | F | D | G | F | V | H | S | I | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
Template Sequence |   |
E | E | R | L | K | L | M | K | K | T | A | I | L | I | N | T | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
| T | T |
|  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|